Botanical Museum, Siatista (collection of serpentine and limestone)
Corfu Museum of Shells, Benitses, Corfu (fossils, recent marine mollusc shells)
Goulandris Museum of Natural History, Kifissia (geology, fossils, rocks, minerals)
Mineralogical Museum, Kamariza
Mineralogical Museum, Lavrion
Museum of Shells of the Greek Seas, Moudiana (large collection of the recent sea shells)
Natural History Museum, Amarousion (paleontology)
Natural History Museum, Elassona (minerals, rocks, fossils)
Natural History Museum of Cephalonia & Ithaca, Argostoli (rocks, fossils, recent marine shells)
Natural History Museum of Crete, Departments of Mineralogy and Geology - Palaeontology  
Natural History Museum of Oeta, Ipati (geology & rocks of Oeta Mt.)
Natural History Museum of the Aegean, Samos (fossils including mammal bones)
Nature-Study & Folk Art Museum of Loutra Almopias, Pella (speleology, paleontology)